CRAN Package Check Results for Package Epoch

Last updated on 2026-10-18 13:52:30 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.7 8.75 82.68 91.43 ERROR
r-devel-linux-x86_64-debian-gcc 1.0.7 5.91 59.90 65.81 ERROR
r-devel-linux-x86_64-fedora-clang 1.0.7 63.59 ERROR
r-devel-linux-x86_64-fedora-gcc 1.0.7 65.85 ERROR
r-devel-windows-x86_64 1.0.7 11.00 121.00 132.00 ERROR
r-patched-linux-x86_64 1.0.7 9.04 76.29 85.33 ERROR
r-release-linux-x86_64 1.0.7 8.32 72.75 81.07 ERROR
r-release-macos-arm64 1.0.7 2.00 77.00 79.00 OK
r-release-macos-x86_64 1.0.7 6.00 156.00 162.00 OK
r-release-windows-x86_64 1.0.7 11.00 123.00 134.00 ERROR
r-oldrel-macos-arm64 1.0.7 2.00 69.00 71.00 OK
r-oldrel-macos-x86_64 1.0.7 7.00 234.00 241.00 OK
r-oldrel-windows-x86_64 1.0.7 14.00 148.00 162.00 ERROR

Check Details

Version: 1.0.7
Check: tests
Result: ERROR Running ‘testthat.R’ [8s/29s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(Epoch) > > test_check("Epoch") Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub010_run2.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================= | 34% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-EpochDownloader.R:238:3'): [[ enforces length 1 ──────────────── Error in `.local(x, i, ...)`: The following data do not exist: FragilityData_subpt2_3 Backtrace: ▆ 1. ├─testthat::expect_silent(downloader[["FragilityData_subpt2_3"]]) at test-EpochDownloader.R:238:3 2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise) 3. │ ├─testthat (local) .capture(...) 4. │ │ ├─withr::with_output_sink(...) 5. │ │ │ └─base::force(code) 6. │ │ ├─base::withCallingHandlers(...) 7. │ │ └─base::withVisible(code) 8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 9. ├─downloader[["FragilityData_subpt2_3"]] 10. └─downloader[["FragilityData_subpt2_3"]] 11. └─Epoch (local) .local(x, i, ...) 12. ├─x[i] 13. └─x[i] 14. └─Epoch (local) .local(x, i, ...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0.7
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘Epoch.Rmd’ using rmarkdown Quitting from Epoch.Rmd:53-58 [load_single] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `.local()`: ! The following data do not exist: FragilityData_subpt01_1 --- Backtrace: ▆ 1. ├─downloader$FragilityData_subpt01_1 2. └─downloader$FragilityData_subpt01_1 3. ├─x[name] 4. └─x[name] 5. └─Epoch (local) .local(x, i, ...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Epoch.Rmd' failed with diagnostics: The following data do not exist: FragilityData_subpt01_1 --- failed re-building ‘Epoch.Rmd’ SUMMARY: processing the following file failed: ‘Epoch.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64

Version: 1.0.7
Check: examples
Result: ERROR Running examples in ‘Epoch-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: EpochDownloader > ### Title: EpochDownloader constructor > ### Aliases: EpochDownloader names,EpochDownloader-method > ### [,EpochDownloader-method $,EpochDownloader-method > ### [[,EpochDownloader-method show,EpochDownloader-method > ### length,EpochDownloader-method wiki wiki,EpochDownloader-method > ### updateRepos EpochRepos > > ### ** Examples > > > EpochRepos() Configuration not fetched yet. Fetching now... Attempting to update project repository configuration... Error in `process_response()`: ! Encountered an unexpected error with the OSF API Please report this at https://github.com/ropensci/osfr/issues * Status code: 503 * Request: https://api.osf.io/v2/nodes/v9qyb/ * Resonse: <!doctype html> <html lang="en"> <head> <meta charset="UTF-8" /> <title>OSF</title> <link rel="icon" href="https://osf.io/favicon.ico" /> <style> body { margin: 0; min-height: 100vh; display: flex; justify-content: center; align-items: center; } main { text-align: center; } p { font-weight: 700; color: #24384a; font-family: 'Open Sans', sans-serif; margin: 0; } a { color: #337ab7; text-decoration: none; } </style> </head> <body> <main> <p>The OSF is currently unavailable for scheduled maintenance.</p> <p>Please come back later.</p> <p> For more details, please visit <a href="https://status.cos.io/" target="_blank" rel="noopener noreferrer">https://status.cos.io/</a> </p> </div> <p style="margin-top:28px; font-size:13px; font-weight:400; color:#607080;"> Request ID: 48cb852c0944e0ad1f710e92132f14bc </p> </main> </body> </html> Backtrace: ▆ 1. └─Epoch::EpochRepos() 2. └─Epoch::updateRepos(verbose = verbose) 3. └─Epoch:::get_config_data() 4. └─osfr::osf_retrieve_node("v9qyb") 5. └─osfr:::.osf_node_retrieve(id) 6. └─osfr:::process_response(res) 7. └─rlang::abort(...) Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.7
Check: tests
Result: ERROR Running ‘testthat.R’ [3s/5s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(Epoch) > > test_check("Epoch") Saving _problems/test-EpochDownloader-5.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 139 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-EpochDownloader.R:5:1'): (code run outside of `test_that()`) ─── Error in `process_response(res)`: Encountered an unexpected error with the OSF API Please report this at https://github.com/ropensci/osfr/issues * Status code: 503 * Request: https://api.osf.io/v2/nodes/v9qyb/ * Resonse: <!doctype html> <html lang="en"> <head> <meta charset="UTF-8" /> <title>OSF</title> <link rel="icon" href="https://osf.io/favicon.ico" /> <style> body { margin: 0; min-height: 100vh; display: flex; justify-content: center; align-items: center; } main { text-align: center; } p { font-weight: 700; color: #24384a; font-family: 'Open Sans', sans-serif; margin: 0; } a { color: #337ab7; text-decoration: none; } </style> </head> <body> <main> <p>The OSF is currently unavailable for scheduled maintenance.</p> <p>Please come back later.</p> <p> For more details, please visit <a href="https://status.cos.io/" target="_blank" rel="noopener noreferrer">https://status.cos.io/</a> </p> </div> <p style="margin-top:28px; font-size:13px; font-weight:400; color:#607080;"> Request ID: 8d80d2641ffb0c37e15c4eb16cb1ff33 </p> </main> </body> </html> Backtrace: ▆ 1. └─Epoch::EpochDownloader() at test-EpochDownloader.R:5:1 2. └─Epoch::EpochRepos(verbose = verbose) 3. └─Epoch::updateRepos(verbose = verbose) 4. └─Epoch:::get_config_data() 5. └─osfr::osf_retrieve_node("v9qyb") 6. └─osfr:::.osf_node_retrieve(id) 7. └─osfr:::process_response(res) 8. └─rlang::abort(...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 139 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.7
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘Epoch.Rmd’ using rmarkdown Quitting from Epoch.Rmd:29-31 [list_projects] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `process_response()`: ! Encountered an unexpected error with the OSF API Please report this at https://github.com/ropensci/osfr/issues * Status code: 503 * Request: https://api.osf.io/v2/nodes/v9qyb/ * Resonse: <!doctype html> <html lang="en"> <head> <meta charset="UTF-8" /> <title>OSF</title> <link rel="icon" href="https://osf.io/favicon.ico" /> <style> body { margin: 0; min-height: 100vh; display: flex; justify-content: center; align-items: center; } main { text-align: center; } p { font-weight: 700; color: #24384a; font-family: 'Open Sans', sans-serif; margin: 0; } a { color: #337ab7; text-decoration: none; } </style> </head> <body> <main> <p>The OSF is currently unavailable for scheduled maintenance.</p> <p>Please come back later.</p> <p> For more details, please visit <a href="https://status.cos.io/" target="_blank" rel="noopener noreferrer">https://status.cos.io/</a> </p> </div> <p style="margin-top:28px; font-size:13px; font-weight:400; color:#607080;"> Request ID: e5cf6e841c87a481a36353f993e34ead </p> </main> </body> </html> --- Backtrace: ▆ 1. └─Epoch::EpochRepos() 2. └─Epoch::updateRepos(verbose = verbose) 3. └─Epoch:::get_config_data() 4. └─osfr::osf_retrieve_node("v9qyb") 5. └─osfr:::.osf_node_retrieve(id) 6. └─osfr:::process_response(res) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Epoch.Rmd' failed with diagnostics: Encountered an unexpected error with the OSF API Please report this at https://github.com/ropensci/osfr/issues * Status code: 503 * Request: https://api.osf.io/v2/nodes/v9qyb/ * Resonse: <!doctype html> <html lang="en"> <head> <meta charset="UTF-8" /> <title>OSF</title> <link rel="icon" href="https://osf.io/favicon.ico" /> <style> body { margin: 0; min-height: 100vh; display: flex; justify-content: center; align-items: center; } main { text-align: center; } p { font-weight: 700; color: #24384a; font-family: 'Open Sans', sans-serif; margin: 0; } a { color: #337ab7; text-decoration: none; } </style> </head> <body> <main> <p>The OSF is currently unavailable for scheduled maintenance.</p> <p>Please come back later.</p> <p> For more details, please visit <a href="https://status.cos.io/" target="_blank" rel="noopener noreferrer">https://status.cos.io/</a> </p> </div> <p style="margin-top:28px; font-size:13px; font-weight:400; color:#607080;"> Request ID: e5cf6e841c87a481a36353f993e34ead </p> </main> </body> </html> --- failed re-building ‘Epoch.Rmd’ SUMMARY: processing the following file failed: ‘Epoch.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.7
Check: tests
Result: ERROR Running ‘testthat.R’ [6s/27s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(Epoch) > > test_check("Epoch") Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub010_run2.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================= | 34% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-EpochDownloader.R:238:3'): [[ enforces length 1 ──────────────── Error in `.local(x, i, ...)`: The following data do not exist: FragilityData_subpt2_3 Backtrace: ▆ 1. ├─testthat::expect_silent(downloader[["FragilityData_subpt2_3"]]) at test-EpochDownloader.R:238:3 2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise) 3. │ ├─testthat (local) .capture(...) 4. │ │ ├─withr::with_output_sink(...) 5. │ │ │ └─base::force(code) 6. │ │ ├─base::withCallingHandlers(...) 7. │ │ └─base::withVisible(code) 8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 9. ├─downloader[["FragilityData_subpt2_3"]] 10. └─downloader[["FragilityData_subpt2_3"]] 11. └─Epoch (local) .local(x, i, ...) 12. ├─x[i] 13. └─x[i] 14. └─Epoch (local) .local(x, i, ...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.0.7
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘Epoch.Rmd’ using rmarkdown Quitting from Epoch.Rmd:53-58 [load_single] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `.local()`: ! The following data do not exist: FragilityData_subpt01_1 --- Backtrace: ▆ 1. ├─downloader$FragilityData_subpt01_1 2. └─downloader$FragilityData_subpt01_1 3. ├─x[name] 4. └─x[name] 5. └─Epoch (local) .local(x, i, ...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Epoch.Rmd' failed with diagnostics: The following data do not exist: FragilityData_subpt01_1 --- failed re-building ‘Epoch.Rmd’ SUMMARY: processing the following file failed: ‘Epoch.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64

Version: 1.0.7
Check: tests
Result: ERROR Running ‘testthat.R’ [5s/21s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(Epoch) > > test_check("Epoch") Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub010_run2.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================= | 34% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-EpochDownloader.R:238:3'): [[ enforces length 1 ──────────────── Error in `.local(x, i, ...)`: The following data do not exist: FragilityData_subpt2_3 Backtrace: ▆ 1. ├─testthat::expect_silent(downloader[["FragilityData_subpt2_3"]]) at test-EpochDownloader.R:238:3 2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise) 3. │ ├─testthat (local) .capture(...) 4. │ │ ├─withr::with_output_sink(...) 5. │ │ │ └─base::force(code) 6. │ │ ├─base::withCallingHandlers(...) 7. │ │ └─base::withVisible(code) 8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 9. ├─downloader[["FragilityData_subpt2_3"]] 10. └─downloader[["FragilityData_subpt2_3"]] 11. └─Epoch (local) .local(x, i, ...) 12. ├─x[i] 13. └─x[i] 14. └─Epoch (local) .local(x, i, ...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.0.7
Check: tests
Result: ERROR Running 'testthat.R' [23s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(Epoch) > > test_check("Epoch") Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub010_run2.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================= | 34% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-EpochDownloader.R:238:3'): [[ enforces length 1 ──────────────── Error in `.local(x, i, ...)`: The following data do not exist: FragilityData_subpt2_3 Backtrace: ▆ 1. ├─testthat::expect_silent(downloader[["FragilityData_subpt2_3"]]) at test-EpochDownloader.R:238:3 2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise) 3. │ ├─testthat (local) .capture(...) 4. │ │ ├─withr::with_output_sink(...) 5. │ │ │ └─base::force(code) 6. │ │ ├─base::withCallingHandlers(...) 7. │ │ └─base::withVisible(code) 8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 9. ├─downloader[["FragilityData_subpt2_3"]] 10. └─downloader[["FragilityData_subpt2_3"]] 11. └─Epoch (local) .local(x, i, ...) 12. ├─x[i] 13. └─x[i] 14. └─Epoch (local) .local(x, i, ...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64

Version: 1.0.7
Check: tests
Result: ERROR Running ‘testthat.R’ [8s/31s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(Epoch) > > test_check("Epoch") Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub010_run2.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================= | 34% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-EpochDownloader.R:238:3'): [[ enforces length 1 ──────────────── Error in `.local(x, i, ...)`: The following data do not exist: FragilityData_subpt2_3 Backtrace: ▆ 1. ├─testthat::expect_silent(downloader[["FragilityData_subpt2_3"]]) at test-EpochDownloader.R:238:3 2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise) 3. │ ├─testthat (local) .capture(...) 4. │ │ ├─withr::with_output_sink(...) 5. │ │ │ └─base::force(code) 6. │ │ ├─base::withCallingHandlers(...) 7. │ │ └─base::withVisible(code) 8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 9. ├─downloader[["FragilityData_subpt2_3"]] 10. └─downloader[["FragilityData_subpt2_3"]] 11. └─Epoch (local) .local(x, i, ...) 12. ├─x[i] 13. └─x[i] 14. └─Epoch (local) .local(x, i, ...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] Error: ! Test failures. Execution halted Flavor: r-patched-linux-x86_64

Version: 1.0.7
Check: examples
Result: ERROR Running examples in ‘Epoch-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: EpochDownloader > ### Title: EpochDownloader constructor > ### Aliases: EpochDownloader names,EpochDownloader-method > ### [,EpochDownloader-method $,EpochDownloader-method > ### [[,EpochDownloader-method show,EpochDownloader-method > ### length,EpochDownloader-method wiki wiki,EpochDownloader-method > ### updateRepos EpochRepos > > ### ** Examples > > > EpochRepos() Configuration not fetched yet. Fetching now... Attempting to update project repository configuration... Error in `process_response()`: ! Encountered an unexpected error with the OSF API Please report this at https://github.com/ropensci/osfr/issues * Status code: 503 * Request: https://api.osf.io/v2/nodes/v9qyb/ * Resonse: <!doctype html> <html lang="en"> <head> <meta charset="UTF-8" /> <title>OSF</title> <link rel="icon" href="https://osf.io/favicon.ico" /> <style> body { margin: 0; min-height: 100vh; display: flex; justify-content: center; align-items: center; } main { text-align: center; } p { font-weight: 700; color: #24384a; font-family: 'Open Sans', sans-serif; margin: 0; } a { color: #337ab7; text-decoration: none; } </style> </head> <body> <main> <p>The OSF is currently unavailable for scheduled maintenance.</p> <p>Please come back later.</p> <p> For more details, please visit <a href="https://status.cos.io/" target="_blank" rel="noopener noreferrer">https://status.cos.io/</a> </p> </div> <p style="margin-top:28px; font-size:13px; font-weight:400; color:#607080;"> Request ID: e0a11285cc7ebbc08f5f748ff7a98999 </p> </main> </body> </html> Backtrace: ▆ 1. └─Epoch::EpochRepos() 2. └─Epoch::updateRepos(verbose = verbose) 3. └─Epoch:::get_config_data() 4. └─osfr::osf_retrieve_node("v9qyb") 5. └─osfr:::.osf_node_retrieve(id) 6. └─osfr:::process_response(res) 7. └─rlang::abort(...) Execution halted Flavor: r-release-linux-x86_64

Version: 1.0.7
Check: tests
Result: ERROR Running ‘testthat.R’ [5s/6s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(Epoch) > > test_check("Epoch") Saving _problems/test-EpochDownloader-5.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 139 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-EpochDownloader.R:5:1'): (code run outside of `test_that()`) ─── Error in `process_response(res)`: Encountered an unexpected error with the OSF API Please report this at https://github.com/ropensci/osfr/issues * Status code: 503 * Request: https://api.osf.io/v2/nodes/v9qyb/ * Resonse: <!doctype html> <html lang="en"> <head> <meta charset="UTF-8" /> <title>OSF</title> <link rel="icon" href="https://osf.io/favicon.ico" /> <style> body { margin: 0; min-height: 100vh; display: flex; justify-content: center; align-items: center; } main { text-align: center; } p { font-weight: 700; color: #24384a; font-family: 'Open Sans', sans-serif; margin: 0; } a { color: #337ab7; text-decoration: none; } </style> </head> <body> <main> <p>The OSF is currently unavailable for scheduled maintenance.</p> <p>Please come back later.</p> <p> For more details, please visit <a href="https://status.cos.io/" target="_blank" rel="noopener noreferrer">https://status.cos.io/</a> </p> </div> <p style="margin-top:28px; font-size:13px; font-weight:400; color:#607080;"> Request ID: c0ed200a96cd3acb6502423d45287718 </p> </main> </body> </html> Backtrace: ▆ 1. └─Epoch::EpochDownloader() at test-EpochDownloader.R:5:1 2. └─Epoch::EpochRepos(verbose = verbose) 3. └─Epoch::updateRepos(verbose = verbose) 4. └─Epoch:::get_config_data() 5. └─osfr::osf_retrieve_node("v9qyb") 6. └─osfr:::.osf_node_retrieve(id) 7. └─osfr:::process_response(res) 8. └─rlang::abort(...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 139 ] Error: ! Test failures. Execution halted Flavor: r-release-linux-x86_64

Version: 1.0.7
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘Epoch.Rmd’ using rmarkdown Quitting from Epoch.Rmd:29-31 [list_projects] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `process_response()`: ! Encountered an unexpected error with the OSF API Please report this at https://github.com/ropensci/osfr/issues * Status code: 503 * Request: https://api.osf.io/v2/nodes/v9qyb/ * Resonse: <!doctype html> <html lang="en"> <head> <meta charset="UTF-8" /> <title>OSF</title> <link rel="icon" href="https://osf.io/favicon.ico" /> <style> body { margin: 0; min-height: 100vh; display: flex; justify-content: center; align-items: center; } main { text-align: center; } p { font-weight: 700; color: #24384a; font-family: 'Open Sans', sans-serif; margin: 0; } a { color: #337ab7; text-decoration: none; } </style> </head> <body> <main> <p>The OSF is currently unavailable for scheduled maintenance.</p> <p>Please come back later.</p> <p> For more details, please visit <a href="https://status.cos.io/" target="_blank" rel="noopener noreferrer">https://status.cos.io/</a> </p> </div> <p style="margin-top:28px; font-size:13px; font-weight:400; color:#607080;"> Request ID: 9fe80f8776572d9ead31e883ba00da0e </p> </main> </body> </html> --- Backtrace: ▆ 1. └─Epoch::EpochRepos() 2. └─Epoch::updateRepos(verbose = verbose) 3. └─Epoch:::get_config_data() 4. └─osfr::osf_retrieve_node("v9qyb") 5. └─osfr:::.osf_node_retrieve(id) 6. └─osfr:::process_response(res) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Epoch.Rmd' failed with diagnostics: Encountered an unexpected error with the OSF API Please report this at https://github.com/ropensci/osfr/issues * Status code: 503 * Request: https://api.osf.io/v2/nodes/v9qyb/ * Resonse: <!doctype html> <html lang="en"> <head> <meta charset="UTF-8" /> <title>OSF</title> <link rel="icon" href="https://osf.io/favicon.ico" /> <style> body { margin: 0; min-height: 100vh; display: flex; justify-content: center; align-items: center; } main { text-align: center; } p { font-weight: 700; color: #24384a; font-family: 'Open Sans', sans-serif; margin: 0; } a { color: #337ab7; text-decoration: none; } </style> </head> <body> <main> <p>The OSF is currently unavailable for scheduled maintenance.</p> <p>Please come back later.</p> <p> For more details, please visit <a href="https://status.cos.io/" target="_blank" rel="noopener noreferrer">https://status.cos.io/</a> </p> </div> <p style="margin-top:28px; font-size:13px; font-weight:400; color:#607080;"> Request ID: 9fe80f8776572d9ead31e883ba00da0e </p> </main> </body> </html> --- failed re-building ‘Epoch.Rmd’ SUMMARY: processing the following file failed: ‘Epoch.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-release-linux-x86_64

Version: 1.0.7
Check: tests
Result: ERROR Running 'testthat.R' [34s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(Epoch) > > test_check("Epoch") Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================= | 34% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub010_run2.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================= | 34% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-EpochDownloader.R:238:3'): [[ enforces length 1 ──────────────── Error in `.local(x, i, ...)`: The following data do not exist: FragilityData_subpt2_3 Backtrace: ▆ 1. ├─testthat::expect_silent(downloader[["FragilityData_subpt2_3"]]) at test-EpochDownloader.R:238:3 2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise) 3. │ ├─testthat (local) .capture(...) 4. │ │ ├─withr::with_output_sink(...) 5. │ │ │ └─base::force(code) 6. │ │ ├─base::withCallingHandlers(...) 7. │ │ └─base::withVisible(code) 8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 9. ├─downloader[["FragilityData_subpt2_3"]] 10. └─downloader[["FragilityData_subpt2_3"]] 11. └─Epoch (local) .local(x, i, ...) 12. ├─x[i] 13. └─x[i] 14. └─Epoch (local) .local(x, i, ...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] Error: ! Test failures. Execution halted Flavor: r-release-windows-x86_64

Version: 1.0.7
Check: tests
Result: ERROR Running 'testthat.R' [41s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(Epoch) > > test_check("Epoch") Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub010_run2.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================= | 34% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% Downloading frag_nih_sub016_run3.rds | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-EpochDownloader.R:238:3'): [[ enforces length 1 ──────────────── Error in `.local(x, i, ...)`: The following data do not exist: FragilityData_subpt2_3 Backtrace: ▆ 1. ├─testthat::expect_silent(downloader[["FragilityData_subpt2_3"]]) at test-EpochDownloader.R:238:3 2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise) 3. │ ├─testthat (local) .capture(...) 4. │ │ ├─withr::with_output_sink(...) 5. │ │ │ └─base::force(code) 6. │ │ ├─base::withCallingHandlers(...) 7. │ │ └─base::withVisible(code) 8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 9. ├─downloader[["FragilityData_subpt2_3"]] 10. └─downloader[["FragilityData_subpt2_3"]] 11. └─Epoch (local) .local(x, i, ...) 12. ├─x[i] 13. └─x[i] 14. └─Epoch (local) .local(x, i, ...) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 188 ] Error: ! Test failures. Execution halted Flavor: r-oldrel-windows-x86_64