Last updated on 2026-10-31 15:51:44 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.3 | 18.88 | 131.82 | 150.70 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.3 | 12.68 | 90.31 | 102.99 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.3 | 12.00 | 82.95 | 94.95 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.3 | 12.00 | 135.17 | 147.17 | ERROR | |
| r-devel-windows-x86_64 | 0.1.3 | 23.00 | 155.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 0.1.3 | 17.07 | 120.78 | 137.85 | OK | |
| r-release-linux-x86_64 | 0.1.3 | 18.24 | 123.61 | 141.85 | OK | |
| r-release-macos-arm64 | 0.1.3 | 4.00 | 58.00 | 62.00 | OK | |
| r-release-macos-x86_64 | 0.1.3 | 13.00 | 353.00 | 366.00 | OK | |
| r-release-windows-x86_64 | 0.1.3 | 21.00 | 154.00 | 175.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.3 | 5.00 | 78.00 | 83.00 | OK | |
| r-oldrel-macos-x86_64 | 0.1.3 | 13.00 | 416.00 | 429.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.3 | 30.00 | 189.00 | 219.00 | OK |
Version: 0.1.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [20s/20s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ieegio)
>
> test_check("ieegio")
Saving _problems/test-hdf5-510.R
Trying to use python `h5py` as the HDF5 backend
Trying to use python `h5py` as the HDF5 backend
<simpleError in loadNamespace(x): cyclic namespace dependency detected when loading 'reticulate', already loading 'reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError in loadNamespace(x): cyclic namespace dependency detected when loading 'reticulate', already loading 'reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError in loadNamespace(x): cyclic namespace dependency detected when loading 'reticulate', already loading 'reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError in loadNamespace(x): cyclic namespace dependency detected when loading 'reticulate', already loading 'reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError in loadNamespace(x): cyclic namespace dependency detected when loading 'reticulate', already loading 'reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError in loadNamespace(x): cyclic namespace dependency detected when loading 'reticulate', already loading 'reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError in loadNamespace(x): cyclic namespace dependency detected when loading 'reticulate', already loading 'reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError in loadNamespace(x): cyclic namespace dependency detected when loading 'reticulate', already loading 'reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError in loadNamespace(x): cyclic namespace dependency detected when loading 'reticulate', already loading 'reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError in loadNamespace(x): cyclic namespace dependency detected when loading 'reticulate', already loading 'reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
[ FAIL 1 | WARN 18 | SKIP 48 | PASS 1622 ]
══ Skipped tests (48) ══════════════════════════════════════════════════════════
• On CRAN (11): 'test-edf.R:3:3', 'test-edf.R:80:3', 'test-hdf5.R:553:3',
'test-hdf5.R:671:3', 'test-volume.R:127:3', 'test-vtk-polys.R:36:3',
'test-vtk-polys.R:60:3', 'test-vtk-polys.R:93:3', 'test-vtk-polys.R:133:3',
'test-vtk-polys.R:157:3', 'test-vtk-polys.R:192:3'
• h5_backend_ready(h5_backend) is not TRUE (2): 'test-hdf5.R:779:5',
'test-hdf5.R:1000:5'
• h5_backend_ready(h5_reader) is not TRUE (4): 'test-hdf5.R:835:7',
'test-hdf5.R:835:7', 'test-hdf5.R:835:7', 'test-hdf5.R:835:7'
• h5_backend_ready(h5_writer) is not TRUE (8): 'test-hdf5.R:834:7',
'test-hdf5.R:834:7', 'test-hdf5.R:834:7', 'test-hdf5.R:834:7',
'test-hdf5.R:834:7', 'test-hdf5.R:834:7', 'test-hdf5.R:834:7',
'test-hdf5.R:834:7'
• ieegio_sample_data("brain.demosubject.nii.gz", test = TRUE) is not TRUE (9):
'test-flirt.R:104:3', 'test-flirt.R:125:3', 'test-flirt.R:140:3',
'test-flirt.R:172:3', 'test-flirt.R:190:3', 'test-flirt.R:208:3',
'test-flirt.R:226:3', 'test-flirt.R:241:3', 'test-flirt.R:262:3'
• ieegio_sample_data("gifti/GzipBase64/sujet01_Lwhite.surf.gii", test = TRUE)
is not TRUE (8): 'test-surface-to-surface.R:2:3',
'test-surface-to-surface.R:24:3', 'test-surface-to-surface.R:52:3',
'test-surface-to-surface.R:89:3', 'test-surface-to-surface.R:158:3',
'test-surface-to-surface.R:202:3', 'test-surface-to-surface.R:242:3',
'test-surface-to-surface.R:289:3'
• ieegio_sample_data("streamlines/CNVII_R.tck", test = TRUE) is not TRUE (1):
'test-tck.R:3:3'
• ieegio_sample_data("streamlines/CNVII_R.trk", test = TRUE) is not TRUE (1):
'test-trk.R:3:3'
• ieegio_sample_data(fname, test = TRUE) is not TRUE (1): 'test-niml.R:431:3'
• nzchar(system.file(package = "hdf5r")) is not TRUE (3): 'test-hdf5.R:154:3',
'test-hdf5.R:249:3', 'test-hdf5.R:337:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-hdf5.R:510:3'): h5lite backend validity checks on write-protected files ──
Expected `io_h5_valid(f, "w")` to be FALSE.
Differences:
`actual`: TRUE
`expected`: FALSE
[ FAIL 1 | WARN 18 | SKIP 48 | PASS 1622 ]
Error:
! Test failures.
There were 50 or more warnings (use warnings() to see the first 50)
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.1.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [68s/69s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ieegio)
>
> test_check("ieegio")
Saving _problems/test-hdf5-510.R
Trying to use python `h5py` as the HDF5 backend
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
Trying to use python `h5py` as the HDF5 backend
<simpleError: 'install_miniconda' is not an exported object from 'namespace:reticulate'>
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
Trying to use python `h5py` as the HDF5 backend
<simpleWarning in check_forbidden_install("Miniconda"): cannot install Miniconda during R CMD check>
[ FAIL 1 | WARN 21 | SKIP 38 | PASS 2077 ]
══ Skipped tests (38) ══════════════════════════════════════════════════════════
• On CRAN (11): 'test-edf.R:3:3', 'test-edf.R:80:3', 'test-hdf5.R:553:3',
'test-hdf5.R:671:3', 'test-volume.R:127:3', 'test-vtk-polys.R:36:3',
'test-vtk-polys.R:60:3', 'test-vtk-polys.R:93:3', 'test-vtk-polys.R:133:3',
'test-vtk-polys.R:157:3', 'test-vtk-polys.R:192:3'
• h5_backend_ready(h5_reader) is not TRUE (3): 'test-hdf5.R:835:7',
'test-hdf5.R:835:7', 'test-hdf5.R:835:7'
• h5_backend_ready(h5_writer) is not TRUE (4): 'test-hdf5.R:834:7',
'test-hdf5.R:834:7', 'test-hdf5.R:834:7', 'test-hdf5.R:834:7'
• ieegio_sample_data("brain.demosubject.nii.gz", test = TRUE) is not TRUE (9):
'test-flirt.R:104:3', 'test-flirt.R:125:3', 'test-flirt.R:140:3',
'test-flirt.R:172:3', 'test-flirt.R:190:3', 'test-flirt.R:208:3',
'test-flirt.R:226:3', 'test-flirt.R:241:3', 'test-flirt.R:262:3'
• ieegio_sample_data("gifti/GzipBase64/sujet01_Lwhite.surf.gii", test = TRUE)
is not TRUE (8): 'test-surface-to-surface.R:2:3',
'test-surface-to-surface.R:24:3', 'test-surface-to-surface.R:52:3',
'test-surface-to-surface.R:89:3', 'test-surface-to-surface.R:158:3',
'test-surface-to-surface.R:202:3', 'test-surface-to-surface.R:242:3',
'test-surface-to-surface.R:289:3'
• ieegio_sample_data("streamlines/CNVII_R.tck", test = TRUE) is not TRUE (1):
'test-tck.R:3:3'
• ieegio_sample_data("streamlines/CNVII_R.trk", test = TRUE) is not TRUE (1):
'test-trk.R:3:3'
• ieegio_sample_data(fname, test = TRUE) is not TRUE (1): 'test-niml.R:431:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-hdf5.R:510:3'): h5lite backend validity checks on write-protected files ──
Expected `io_h5_valid(f, "w")` to be FALSE.
Differences:
`actual`: TRUE
`expected`: FALSE
[ FAIL 1 | WARN 21 | SKIP 38 | PASS 2077 ]
Error:
! Test failures.
There were 48 warnings (use warnings() to see them)
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc